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5 May 2014
BMRC
Genome Institute of Singapore
Direct Evidence for Pitavastatin Induced Chromatin Structure Change in the KLF4 Gene in Endothelial Cells
Akimune Asanuma,
Sohei Tanabe,
Naohito Nozaki,
Hiroyuki Aburatani,
Masaomi Nangaku,
Yijun Ruan,
Xiaoan Ruan,
Hideyuki Tanabe,
Toshiya Tanaka,
Takashi Minami,
Takao Hamakubo,
Juro Sakai,
Sigeo Ihara,
Akira Endo,
Tatsuhiko Kodama,
Youichiro Wada,
Masanori Aikawa,
Takashi Maejima,
Tsuyoshi Inoue,
Yasuharu Kanki,
Takahide Kohro,
Guoliang Li,
Yoshihiro Ohta,
Hiroshi Kimura,
Mika Kobayashi,
Akashi Taguchi,
Shuichi Tsutsumi,
Hiroko Iwanari,
Shogo Yamamoto,
Hirofumi Aruga,
Shoulian Dong,
Junko F. Stevens,
Huay Mei Poh,
Kazuki Yamamoto,
Takeshi Kawamura,
Imari Mimura,
Jun-ichi Suehiro,
Akira Sugiyama,
Kiyomi Kaneki,
Haruki Shibata,
Yasunobu Yoshinaka,
Takeshi Doi
PLoS ONE
10 Apr 2014
BMRC
Genome Institute of Singapore
Cross-enhancement of ANGPTL4 transcription by HIF1 alpha and PPAR beta/delta is the result of the conformational proximity of two response elements
Tsuyoshi Inoue,
Takahide Kohro,
Toshiya Tanaka,
Yasuharu Kanki,
Guoliang Li,
Huay-Mei Poh,
Imari Mimura,
Mika Kobayashi,
Akashi Taguchi,
Takashi Maejima,
Jun-ichi Suehiro,
Akira Sugiyama,
Kiyomi Kaneki,
Hirofumi Aruga,
Shoulian Dong,
Junko F Stevens,
Shogo Yamamoto,
Shuichi Tsutsumi,
Toshiro Fujita,
Xiaoan Ruan,
Hiroyuki Aburatani,
Masaomi Nangaku,
Yijun Ruan,
Tatsuhiko Kodama,
Youichiro Wada
Genome Biology
6 Mar 2014
BMRC
Genome Institute of Singapore
Detection of Chromosomal Breakpoints in Patients with Developmental Delay and Speech Disorders
Kagistia H. Utami,
Axel M. Hillmer,
Irene Aksoy,
Elaine G. Y. Chew,
Audrey S. M. Teo,
Zhenshui Zhang,
Charlie W. H. Lee,
Pauline J. Chen,
Chan Chee Seng,
Pramila N. Ariyaratne,
Sigrid L. Rouam,
Lim Seong Soo,
Saira Yousoof,
Ivan Prokudin,
Gregory Peters,
Felicity Collins,
Meredith Wilson,
Alyson Kakakios,
Georges Haddad,
Arnaud Menuet,
Olivier Perche,
Stacey Kiat Hong Tay,
Ken W. K. Sung,
Xiaoan Ruan,
Yijun Ruan,
Edison T. Liu,
Sylvain Briault,
Robyn V. Jamieson,
Sonia Davila,
Valere Cacheux,
Osman El-Maarri
PLoS ONE
3 Jan 2014
BMRC
Genome Institute of Singapore
Specific gene-regulation networks during the pre-implantation development of the pig embryo as revealed by deep sequencing
Suying Cao,
Jianyong Han,
Jun Wu,
Qiuyan Li,
Shichao Liu,
Wei Zhang,
Yangli Pei,
Xiaoan Ruan,
Zhonghua Liu,
Xumin Wang,
Bing Lim,
Ning Li
BMC Genomics
13 Dec 2012
BMRC
Genome Institute of Singapore
Whole-genome reconstruction and mutational signatures in gastric cancer
Niranjan Nagarajan,
Denis Bertrand,
Axel M Hillmer,
Zhi Jiang Zang,
Fei Yao,
Pierre-Étienne Jacques,
Audrey SM Teo,
Ioana Cutcutache,
Zhenshui Zhang,
Wah Heng Lee,
Yee Yen Sia,
Song Gao,
Pramila N Ariyaratne,
Andrea Ho,
Xing Yi Woo,
Lavanya Veeravali,
Choon Kiat Ong,
Niantao Deng,
Kartiki V Desai,
Chiea Chuen Khor,
Martin L Hibberd,
Atif Shahab,
Yijun Ruan,
Jaideepraj Rao,
Mengchu Wu,
Ming Teh,
Feng Zhu,
Sze Yung Chin,
Brendan Pang,
Jimmy BY So,
Guillaume Bourque,
Richie Soong,
Wing-Kin Sung,
Bin Tean Teh,
Steven Rozen,
Xiaoan Ruan,
Khay Guan Yeoh,
Patrick BO Tan
Genome Biology
25 Nov 2012
BMRC
Genome Institute of Singapore
The draft genome of sweet orange (Citrus sinensis)
Qiang Xu,
Ling-Ling Chen,
Xiaoan Ruan,
Dijun Chen,
Andan Zhu,
Chunli Chen,
Denis Bertrand,
Wen-Biao Jiao,
Bao-Hai Hao,
Matthew P Lyon,
Jiongjiong Chen,
Song Gao,
Feng Xing,
Hong Lan,
Ji-Wei Chang,
Xianhong Ge,
Yang Lei,
Qun Hu,
Yin Miao,
Lun Wang,
Shixin Xiao,
Manosh Kumar Biswas,
Wenfang Zeng,
Fei Guo,
Hongbo Cao,
Xiaoming Yang,
Xi-Wen Xu,
Yun-Jiang Cheng,
Juan Xu,
Ji-Hong Liu,
Oscar Junhong Luo,
Zhonghui Tang,
Wen-Wu Guo,
Hanhui Kuang,
Hong-Yu Zhang,
Mikeal L Roose,
Niranjan Nagarajan,
Xiu-Xin Deng,
Yijun Ruan
Nature Genetics
20 Jan 2012
BMRC
Genome Institute of Singapore
Extensive Promoter-Centered Chromatin Interactions Provide a Topological Basis for Transcription Regulation
Mark Gerstein,
Guoliang Li,
Xiaoan Ruan,
Raymond K. Auerbach,
Kuljeet Singh Sandhu,
Meizhen Zheng,
Ping Wang,
Huay Mei Poh,
Yufen Goh,
Joanne Lim,
Jingyao Zhang,
Hui Shan Sim,
Su Qin Peh,
Fabianus Hendriyan Mulawadi,
Chin Thing Ong,
Yuriy L. Orlov,
Shuzhen Hong,
Zhizhuo Zhang,
Steve Landt,
Debasish Raha,
Ghia Euskirchen,
Chia-Lin Wei,
Weihong Ge,
Huaien Wang,
Carrie Davis,
Katherine I. Fisher-Aylor,
Ali Mortazavi,
Thomas Gingeras,
Barbara Wold,
Yi Sun,
Melissa J. Fullwood,
Edwin Cheung,
Edison Liu,
Wing-Kin Sung,
Michael Snyder,
Yijun Ruan
Cell
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