Search results

Publication date Communities Collections Article title Author(s) Journal/Conference
15 Feb 2024 BMRC Bioinformatics Institute Coarse-Grained Model of Glycosaminoglycans for Biomolecular Simulations Aishwary T. Shivgan, Jan K. Marzinek, Alexander Krah, Paul Matsudaira, Chandra S. Verma, Peter J. Bond Journal of Chemical Theory and Computation
23 Dec 2023 BMRC Bioinformatics Institute Mechanisms of allostery at the viral surface through the eyes of molecular simulation Firdaus Samsudin, Lorena Zuzic, Jan K. Marzinek, Peter J. Bond Current Opinion in Structural Biology
8 Dec 2023 BMRC Bioinformatics Institute Membrane platform protein PulF of the Klebsiella type II secretion system forms a trimeric ion channel essential for endopilus assembly and protein secretion Ingrid Guilvout, Firdaus Samsudin, Roland G. Huber, Peter J. Bond, Benjamin Bardiaux, Olivera Francetic mBio
20 Nov 2023 BMRC Bioinformatics Institute Variations of the Mycobacterium abscessus F-ATP synthase subunit a-c interface alter binding and potency of the anti-TB drug bedaquiline Alexander Krah, Priya Ragunathan, Peter J. Bond, Gerhard Gruber Biochemical and Biophysical Research Communications
29 Sep 2023 BMRC Bioinformatics Institute Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs Ganna Petruk, Manoj Puthia, Firdaus Samsudin, Jitka Petrlova, Franziska Olm, Margareta Mittendorfer, Snejana Hyllén, Dag Edström, Ann-Charlotte Strömdahl, Carl Diehl, Simon Ekström, Björn Walse, Sven Kjellstrom, Peter J. Bond, Sandra Lindstedt, Artur Schmidtchen Nature Communications
10 Sep 2023 BMRC Bioinformatics Institute Bioactive Suture with Added Innate Defense Functionality for the Reduction of Bacterial Infection and Inflammation Manoj Puthia, Jitka Petrlova, Ganna Petruk, Marta Butrym, Firdaus Samsudin, Madelene Å Andersson, Ann‐Charlotte Strömdahl, Sebastian Wasserstrom, Erik Hartman, Sven Kjellstrom, Lucrezia Caselli, Oxana Klementieva, Peter J. Bond, Martin Malmsten, Deepak Bushan Raina, Artur Schmidtchen Advanced Healthcare Materials
16 Jun 2023 BMRC Bioinformatics Institute Impact on S. aureus and E. coli Membranes of Treatment with Chlorhexidine and Alcohol Solutions: Insights from Molecular Simulations and Nuclear Magnetic Resonance Callum Waller, Jan K. Marzinek, Eilish McBurnie, Peter J. Bond, Philip T.F. Williamson, Syma Khalid Journal of Molecular Biology
8 May 2023 BMRC Bioinformatics Institute Nature-inspired synthetic oligourea foldamer channels allow water transport with high salt rejection Chiranjit Dutta, Pannaga Krishnamurthy, Dandan Su, Sung Hyun Yoo, Gavin W. Collie, Morgane Pasco, Jan K. Marzinek, Peter J. Bond, Chandra Verma, Axelle Grélard, Antoine Loquet, Jianwei Li, Min Luo, Mihail Barboiu, Gilles Guichard, R. Manjunatha Kini, Prakash P. Kumar Chem
3 May 2023 BMRC Bioinformatics Institute Dengue Virus Capsid Protein Facilitates Genome Compaction and Packaging Priscilla L. S. Boon, Ana S. Martins, Xin Ni Lim, Francisco J. Enguita, Nuno C. Santos, Peter J. Bond, Yue Wan, Ivo C. Martins, Roland G. Huber International Journal of Molecular Sciences
10 May 2020 BMRC Bioinformatics Institute Extending the Martini coarse-grained forcefield to N-glycans Aishwary T. Shivgan, Jan K. Marzinek, Roland G. Huber, Alexander Krah, Richard H. Henchman, Paul Matsudaira, Chandra S. Verma, Peter J. Bond bioRxiv