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Publication date Communities Collections Article title Author(s) Journal/Conference
3 Oct 2024 BMRC Institute of Molecular and Cell Biology Proteome-wide CETSA reveals diverse apoptosis-inducing mechanisms converging on an initial apoptosis effector stage at the nuclear periphery Anderson Daniel Ramos, Ying Yu Liang, Olga Surova, Smaranda Bacanu, Marc-Antoine Gerault, Tamoghna Mandal, Sophia Ceder, Anette Langebäck, Albin Österroos, George A. Ward, Jonas Bergh, Klas G. Wiman, Sören Lehmann, Nayana Prabhu, Sara Lööf, Pär Nordlund Cell Reports
19 Jul 2024 SERC Institute for Infocomm Research Hybrid Model Design For Protein Function Prediction Shenghao Zhao, Xiaoyu Zhang, Ziyuan Zhao, Peisheng Qian, Weide Liu, Zeng Zeng, Bharadwaj Veeravalli, Lingyun Dai, Pär Nordlund, Nayana Prabhu, Wai Leong Tam, Xulei Yang International Conference of the IEEE Engineering in Medicine and Biology Society
22 Jan 2024 SERC Institute for Infocomm Research Deep learning based CETSA feature prediction cross multiple cell lines with latent space representation Shenghao Zhao, Xulei Yang, Zeng Zeng, Peisheng Qian, Ziyuan Zhao, Lingyun Dai, Nayana Prabhu, Pär Nordlund, Wai Leong Tam Scientific Reports
8 Sep 2022 BMRC Genome Institute of Singapore CycleDNN - A Novel Deep Neural Network Model for CETSA Feature Prediction cross Cell Lines Zeng Zeng, Shenghao Zhao, Qing Da, Peisheng Qian, Tam Wai Leong, Lingyun Dai, Pär Nordlund, Nayana Prabhu, Ziyuan Zhao, Xulei Yang 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
8 Sep 2022 BMRC Genome Institute of Singapore CETSA Feature Based Clustering for Protein Outlier Discovery by Protein-to-Protein Interaction Prediction Xulei Yang, Qing Da, Peisheng Qian, Bharadwaj Veeravalli, Tam Wai Leong, Lingyun Dai, Pär Nordlund, Nayana Prabhu, Ziyuan Zhao, Zeng Zeng 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
14 Jul 2021 BMRC Institute of Molecular and Cell Biology CETSA interaction proteomics define specific RNA-modification pathways as key components of fluorouracil-based cancer drug cytotoxicity Ying Yu Liang, Smaranda Bacanu, Lekshmy Sreekumar, Anderson Daniel Ramos, Lingyun Dai, Martin Michaelis, Jindrich Cinatl, Takahiro Seki, Yihai Cao, Cynthia R. Coffill, David P. Lane, Nayana Prabhu, Pär Nordlund Cell Chemical Biology
3 Feb 2021 BMRC Genome Institute of Singapore Recent advances in proteome‐wide label‐free target deconvolution for bioactive small molecules Jichao Sun, Nayana Prabhu, Jun Tang, Fan Yang, Lin Jia, Jinan Guo, Kefeng Xiao, Wai Leong Tam, Pär Nordlund, Lingyun Dai Medicinal Research Reviews
2 Apr 2019 BMRC Institute of Molecular and Cell Biology Horizontal Cell Biology: Monitoring Global Changes of Protein Interaction States with the Proteome-Wide Cellular Thermal Shift Assay (CETSA) Lingyun Dai, Nayana Prabhu, Liang Ying Yu, Smaranda Bacanu, Anderson Daniel Ramos, Pär Nordlund Annual Reviews
14 Mar 2019 BMRC Institute of Molecular and Cell Biology Monitoring structural modulation of redox-sensitive proteins in cells with MS-CETSA Wendi Sun, Lingyun Dai, Han Yu, Brenda Puspita, Tianyun Zhao, Feng Li, Justin L. Tan, Yan Ting Lim, Ming Wei Chen, Radoslaw M. Sobota, Daniel G. Tenen, Nayana Prabhu, Pär Nordlund Redox Biology
26 Apr 2018 BMRC Institute of Molecular and Cell Biology Modulation of Protein-Interaction States through the Cell Cycle Lingyun Dai, Tianyun Zhao, Xavier Bisteau, Wendi Sun, Nayana Prabhu, Yan Ting Lim, Radoslaw M. Sobota, Philipp Kaldis, Pär Nordlund Cell