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10 May 2020 BMRC Bioinformatics Institute Extending the Martini coarse-grained forcefield to N-glycans Aishwary T. Shivgan, Jan K. Marzinek, Roland G. Huber, Alexander Krah, Richard H. Henchman, Paul Matsudaira, Chandra S. Verma, Peter J. Bond
5 Apr 2020 BMRC Bioinformatics Institute A benzene-mapping approach for uncovering cryptic pockets in membrane-bound proteins Lorena Zuzic, Jan K. Marzinek, Jim Warwicker, Peter J. Bond
25 Jan 2020 BMRC Bioinformatics Institute Multiscale modelling and simulation of viruses Jan K. Marzinek, Roland G. Huber, Peter J. Bond
19 Sep 2019 BMRC Bioinformatics Institute Molecular basis of dengue virus serotype 2 morphological switch from 29°C to 37°C Xin-Ni Lim, Chao Shan, Jan K. Marzinek, Hongping Dong, Thiam Seng Ng, Justing S. G. Ooi, Guntur Fibrianshah, Jiaqi Wang, Chandra S. Verma, Peter J. Bond, Pei-Yong Shi, Shee-Mei Lok
27 Aug 2019 BMRC Bioinformatics Institute The structural basis for membrane assembly of immunoreceptor signalling complexes Namita Dube, Jan K. Marzinek, Robert C. Glen, Peter J. Bond
24 Jul 2019 BMRC Bioinformatics Institute Multiscale modeling of innate immune receptors: Endotoxin recognition and regulation by host defense peptides Daniel A. Holdbrook, Roland G. Huber, Jan K. Marzinek, Astrid Stubbusch, Artur Schmitchen, Peter J. Bond
26 Jun 2019 BMRC Bioinformatics Institute A T164S mutation in the dengue virus NS1 protein is associated with greater disease severity in mice Kitti Wing Ki Chan, Satoru Watanabe, Jocelyn Y. Jin, Julien Pompon, Don Teng, Sylvie Alonso, Dhanasekaran Vijaykrishna, Scott B. Halstead, Jan K. Marzinek, Peter J. Bond, Bo Burla, Federico Torta, Markus R. Wenk, Eng Eong Ooi, Subhash G. Vasudevan
1 Mar 2019 BMRC Bioinformatics Institute Insights into water accessible pathways and the inactivation mechanism of proton translocation by the membrane-embedded domain of V-type ATPases Alexander Krah, Jan K. Marzinek, Peter J. Bond
28 Feb 2019 BMRC Bioinformatics Institute The disordered plant dehydrin Lti30 protects the membrane during water-related stress by cross-linking lipids Anjali Gupta, Jan K. Marzinek, Damien Jefferies, Peter J. Bond, Pia Harryson, Thorsten Wohland
24 Jan 2019 BMRC Bioinformatics Institute Infectivity of Dengue Virus Serotypes 1 and 2 Is Correlated with E-Protein Intrinsic Dynamics but Not to Envelope Conformations Kamal Kant Sharma, Xin-Xiang Lim, Sarala Neomi Tantirimudalige, Anjali Gupta, Jan K. Marzinek, Daniel Holdbrook, Xin Ying Elisa Lim, Peter J. Bond, Ganesh S. Anand, Thorsten Wohland
21 Nov 2018 BMRC Bioinformatics Institute Mechanism of enhanced immature dengue virus attachment to endosomal membrane induced by prM antibody Melissa Wirawan, Guntur Fibriansah, Jan K. Marzinek, Xin Xiang Lim, Thiam Seng Ng, Adelene Y. L. Sim, Qian Zhang, Victor A. Kostyuchenko, Jian Shi, Scott A. Smith, Chandra S. Verma, Ganesh Anand, James E. Crowe Jr, Peter J. Bond, Shee-Mei Lok
21 Nov 2018 BMRC Bioinformatics Institute Mechanism of Enhanced Immature Dengue Virus Attachment to Endosomal Membrane Induced by prM Antibody Melissa Wirawan, Guntur Fibriansah, Jan K. Marzinek, Xin Xiang Lim, Thiam-Seng Ng, Adelene Y. L. Sim, Qian Zhang, Victor A. Kostyuchenko, Jian Shi, Scott A. Smith, Chandra S. Verma, Ganesh Anand, James E. Jr Crowe, Peter J. Bond, Shee-Mei Lok
14 Sep 2018 BMRC Bioinformatics Institute Single-molecule studies of flavivirus envelope dynamics: Experiment and computation Kamal Kant Sharma, Jan K. Marzinek, Sarala Neomi Tantirimudalige, Peter J. Bond, Thorsten Wohland
20 Jul 2018 BMRC Bioinformatics Institute The architecture of the OmpC-MlaA complex sheds light on the maintenance of outer membrane lipid asymmetry in Escherichia coli Jiang Yeow, Kang Wei Tan, Daniel A. Holdbrook, Zhi-Soon Chong, Jan K. Marzinek, Peter J. Bond, Shu-Sin Chng
17 May 2018 BMRC Bioinformatics Institute A Thermodynamic Funnel Drives Bacterial Lipopolysaccharide Transfer in the TLR4 Pathway Roland G. Huber, Nils A. Berglund, Vasileios Kargas, Jan K. Marzinek, Daniel A. Holdbrook, Syma Khalid, Thomas J. Piggot, Artur Schmidtchen, Peter J. Bond
7 Jul 2016 BMRC Bioinformatics Institute Pushing the Envelope: Dengue Viral Membrane Coaxed into Shape by Molecular Simulations Jan K. Marzinek, Daniel A. Holdbrook, Roland G. Huber, Chandra Verma, Peter J. Bond
20 Jan 2016 BMRC Bioinformatics Institute Characterizing the Conformational Landscape of Flavivirus Fusion Peptides via Simulation and Experiment Jan K. Marzinek, Rajamani Lakshminarayanan, Eunice Goh, Roland G. Huber, Sadhana Panzade, Chandra Verma, Peter J. Bond