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15 Feb 2024
BMRC
Bioinformatics Institute
Coarse-Grained Model of Glycosaminoglycans for Biomolecular Simulations
Aishwary T. Shivgan,
Jan K. Marzinek,
Alexander Krah,
Paul Matsudaira,
Chandra S. Verma,
Peter J. Bond
Journal of Chemical Theory and Computation
23 Dec 2023
BMRC
Bioinformatics Institute
Mechanisms of allostery at the viral surface through the eyes of molecular simulation
Firdaus Samsudin,
Lorena Zuzic,
Jan K. Marzinek,
Peter J. Bond
Current Opinion in Structural Biology
16 Jun 2023
BMRC
Bioinformatics Institute
Impact on S. aureus and E. coli Membranes of Treatment with Chlorhexidine and Alcohol Solutions: Insights from Molecular Simulations and Nuclear Magnetic Resonance
Callum Waller,
Jan K. Marzinek,
Eilish McBurnie,
Peter J. Bond,
Philip T.F. Williamson,
Syma Khalid
Journal of Molecular Biology
8 May 2023
BMRC
Bioinformatics Institute
Nature-inspired synthetic oligourea foldamer channels allow water transport with high salt rejection
Chiranjit Dutta,
Pannaga Krishnamurthy,
Dandan Su,
Sung Hyun Yoo,
Gavin W. Collie,
Morgane Pasco,
Jan K. Marzinek,
Peter J. Bond,
Chandra Verma,
Axelle Grélard,
Antoine Loquet,
Jianwei Li,
Min Luo,
Mihail Barboiu,
Gilles Guichard,
R. Manjunatha Kini,
Prakash P. Kumar
Chem
10 May 2020
BMRC
Bioinformatics Institute
Extending the Martini coarse-grained forcefield to N-glycans
Aishwary T. Shivgan,
Jan K. Marzinek,
Roland G. Huber,
Alexander Krah,
Richard H. Henchman,
Paul Matsudaira,
Chandra S. Verma,
Peter J. Bond
bioRxiv
5 Apr 2020
BMRC
Bioinformatics Institute
A benzene-mapping approach for uncovering cryptic pockets in membrane-bound proteins
Lorena Zuzic,
Jan K. Marzinek,
Jim Warwicker,
Peter J. Bond
bioRxiv
25 Jan 2020
BMRC
Bioinformatics Institute
Multiscale modelling and simulation of viruses
Jan K. Marzinek,
Roland G. Huber,
Peter J. Bond
Current Opinion in Structural Biology
19 Sep 2019
BMRC
Bioinformatics Institute
Molecular basis of dengue virus serotype 2 morphological switch from 29°C to 37°C
Xin-Ni Lim,
Chao Shan,
Jan K. Marzinek,
Hongping Dong,
Thiam Seng Ng,
Justing S. G. Ooi,
Guntur Fibrianshah,
Jiaqi Wang,
Chandra S. Verma,
Peter J. Bond,
Pei-Yong Shi,
Shee-Mei Lok
PLOS Pathogens
27 Aug 2019
BMRC
Bioinformatics Institute
The structural basis for membrane assembly of immunoreceptor signalling complexes
Namita Dube,
Jan K. Marzinek,
Robert C. Glen,
Peter J. Bond
Journal of Molecular Modeling
24 Jul 2019
BMRC
Bioinformatics Institute
Multiscale modeling of innate immune receptors: Endotoxin recognition and regulation by host defense peptides
Daniel A. Holdbrook,
Roland G. Huber,
Jan K. Marzinek,
Astrid Stubbusch,
Artur Schmitchen,
Peter J. Bond
Pharmacological Research
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