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Publication date Communities Collections Article title Author(s) Journal/Conference
30 Jan 2020 BMRC Institute of Molecular and Cell Biology Loss-of-function mutations in UDP-Glucose 6-Dehydrogenase cause recessive developmental epileptic encephalopathy Monica Yau, Nader Handal, Werner Deigendesch, Reinhard Keimer, Hiyam M. Marzouqa, Holger Hengel, Célia Bosso-Lefèvre, George Grady, Emmanuelle Szenker-Ravi, Hankun Li, Sarah Pierce, Élise Lebigot, Thong-Teck Tan, Michelle Y. Eio, Gunaseelan Narayanan, Kagistia Hana Utami, Meral Gunay-Aygun, Michael J. Muriello, Helene Verhelst, Sarah Weckhuysen, Sonal Mahida, Sakkubai Naidu, Terrence G. Thomas, Jiin Ying Lim, Ee Shien Tan, Damien Haye, Michèl A. A. P. Willemsen, Renske Oegema, Wendy G. Mitchell, Tyler Mark Pierson, Marisa V. Andrews, Marcia C. Willing, Lance H. Rodan, Tahsin Stefan Barakat, Marjon van Slegtenhorst, Ralitza H. Gavrilova, Diego Martinelli, Tal Gilboa, Abdullah M. Tamim, Mais O. Hashem, Moeenaldeen D. AlSayed, Maha M. Abdulrahim, Mohammed Al-Owain, Ali Awaji, Adel A. H. Mahmoud, Eissa A. Faqeih, Ali Al Asmari, Sulwan M. Algain, Lamyaa A. Jad, Hesham M. Aldhalaan, Ingo Helbig, David A. Koolen, Angelika Riess, Ingeborg Kraegeloh-Mann, Peter Bauer, Suleyman Gulsuner, Hannah Stamberger, Alvin Yu Jin Ng, Sha Tang, Sumanty Tohari, Boris Keren, Laura E. Schultz-Rogers, Eric W. Klee, Sabina Barresi, Marco Tartaglia, Hagar Mor-Shaked, Sateesh Maddirevula, Amber Begtrup, Aida Telegrafi, Rolph Pfundt, Rebecca Schüle, Brian Ciruna, Carine Bonnard, Mahmoud A. Pouladi, James C. Stewart, Adam Claridge-Chang, Dirk J. Lefeber, Fowzan S. Alkuraya, Bruno Reversade, Ajay S. Mathuru, Byrappa Venkatesh, Joseph J. Barycki, Melanie A. Simpson, Saumya S. Jamuar, Ludger Schöls Nature Communications
23 Jan 2020 BMRC Institute of Molecular and Cell Biology Oxygenation properties of hemoglobin and the evolutionary origins of isoform multiplicity in an amphibious air-breathing fish, the blue-spotted mudskipper (Boleophthalmus pectinirostris) Jay F. Storz, Chandrasekhar Natarajan, Magnus K. Grouleff, Michael Vandewege, Federico G. Hoffmann, Xinxin You, Byrappa Venkatesh, Angela Fago Journal of Experimental Biology
8 Jul 2019 BMRC Institute of Molecular and Cell Biology Novel mutation in HTRA1 in a family with diffuse white matter lesions and inflammatory features Amin Ziaei, Xiaohong Xu, Leila Dehghani, Carine Bonnard, Andreas Zellner, Alvin Yu Jin Ng, Sumanty Tohari, Byrappa Venkatesh, Christof Haffner, Bruno Reversade, Vahid Shaygannejad, Mahmoud A. Pouladi Neurology Genetics
19 Oct 2018 BMRC Institute of Molecular and Cell Biology Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates Mónica Lopes-Marques, Naoki Kabeya, Yu Qian, Raquel Ruivo, Miguel M. Santos, Byrappa Venkatesh, Douglas R. Tocher, L. Filipe C. Castro, Óscar Monroig BMC Evolutionary Biology
6 Sep 2018 BMRC Institute of Molecular and Cell Biology Characterization of Gonadotropin-Releasing Hormone (GnRH) Genes From Cartilaginous Fish: Evolutionary Perspectives Anne-Laure Gaillard, Boon-Hui Tay, Daniela I. Pérez Sirkin, Anne-Gaëlle Lafont, Céline De Flori, Paula G. Vissio, Sylvie Mazan, Sylvie Dufour, Byrappa Venkatesh, Hervé Tostivint Frontiers in Neuroscience
24 Jul 2018 BMRC Institute of Molecular and Cell Biology Cenani-Lenz syndactyly syndrome - a case report of a family with isolated syndactyly Dineshani Hettiaracchchi, Carine Bonnard, S. M. A. Jayawardana, Alvin Yu Jin Ng, Sumanty Tohari, Byrappa Venkatesh, Bruno Reversade, Roshni Singaraja, V. H. W. Dissanayake BMC Medical Genetics
19 Mar 2018 BMRC Institute of Molecular and Cell Biology Expansions, diversification, and interindividual copy number variations of AID/APOBEC family cytidine deaminase genes in lampreys Stephen J. Holland, Lesley M. Berghuis, Justin J. King, Lakshminarayan M. Iyer, Katarzyna Sikora, Heather Fifield, Sarah Peter, Emma M. Quinlan, Fumiaki Sugahara, Prashant Shingate, Inês Trancoso, Norimasa Iwanami, Elena Temereva, Christine Strohmeier, Shigeru Kuratani, Byrappa Venkatesh, Guillaume Evanno, L. Aravind, Michael Schorpp, Mani Larijani, Thomas Boehm Proceedings of the National Academy of Sciences of the United States of America
15 Feb 2018 BMRC Institute of Molecular and Cell Biology The Divergent Genomes of Teleosts Vydianathan Ravi, Byrappa Venkatesh Annual Review of Animal Biosciences
27 Sep 2017 BMRC Institute of Molecular and Cell Biology Voltage-gated sodium channel gene repertoire of lampreys: gene duplications, tissue-specific expression and discovery of a long-lost gene Harold H. Zakon, Weiming Li, Nisha E. Pillai, Sumanty Tohari, Prashant Shingate, Jianfeng Ren, Byrappa Venkatesh Proceedings of the Royal Society B: Biological Sciences
26 Sep 2017 BMRC Institute of Molecular and Cell Biology Priming of lineage-specifying genes by Bcl11b is required for lineage choice in post-selection thymocytes Satoshi Kojo, Hirokazu Tanaka, Takaho A. Endo, Sawako Muroi, Ye Liu, Wooseok Seo, Mari Tenno, Kiyokazu Kakugawa, Yoshinori Naoe, Krutula Nair, Kazuyo Moro, Yoshinori Katsuragi, Akinori Kanai, Toshiya Inaba, Takeshi Egawa, Byrappa Venkatesh, Aki Minoda, Ryo Kominami, Ichiro Taniuchi Nature Communications
7 Sep 2017 BMRC Institute of Molecular and Cell Biology CDK10 Mutations in Humans and Mice Cause Severe Growth Retardation, Spine Malformations, and Developmental Delays Katharina Roetzer, Paul Roschger, Klaus Klaushofer, Janine Altmüller, Sudipto Roy, Byrappa Venkatesh, Rudolf Ganger, Franz Grill, Christian Windpassinger, Juliette Piard, Carine Bonnard, Majid Alfadhel, Shuhui Lim, Xavier Bisteau, Verena Rupp, Stéphane Blouin, Nur’Ain B. Ali, Alvin Yu Jin Ng, Hao Lu, Sumanty Tohari, S. Zakiah A. Talib, Noémi van Hul, Matias J. Caldez, Lionel Van Maldergem, Gökhan Yigit, Hulya Kayserili, Sameh A. Youssef, Vincenzo Coppola, Alain de Bruin, Lino Tessarollo, Hyungwon Choi, Farid Ben Chehida, Bernd Wollnik, Umut Altunoglu, Ali Al Kaissi, Bruno Reversade, Philipp Kaldis American Journal of Human Genetics (AJHG)
22 Aug 2017 BMRC Institute of Molecular and Cell Biology Lampreys, the jawless vertebrates, contain only two ParaHox gene clusters Huixian Zhang, Vydianathan Ravi, Boon-Hui Tay, Sumanty Tohari, Nisha E. Pillai, Aravind Prasad, Qiang Lin, Sydney Brenner, Byrappa Venkatesh Proceedings of the National Academy of Sciences
22 Apr 2017 BMRC Institute of Molecular and Cell Biology Draft genome of the lined seahorse, Hippocampus erectus Ruobo Gu, Meng Xu, Qiang Lin, Ying Qiu, Jia Li, Chao Bian, Huixian Zhang, Geng Qin, Yanhong Zhang, Wei Luo, Jieming Chen, Xinxin You, Mingjun Fan, Min Sun, Pao Xu, Byrappa Venkatesh, Junming Xu, Hongtuo Fu, Qiong Shi GigaScience
21 Jan 2016 BMRC Bioinformatics Institute The p53–Mdm2 interaction and the E3 ligase activity of Mdm2/Mdm4 are conserved from lampreys to humans Cynthia R. Coffill, Alison P. Lee, Jia Wei Siau, Sharon M. Chee, Thomas L. Joseph, Yaw Sing Tan, Arumugam Madhumalar, Boon-Hui Tay, Sydney Brenner, Chandra S. Verma, Farid J. Ghadessy, Byrappa Venkatesh, David P. Lane Genes & Development
5 Nov 2015 BMRC Institute of Molecular and Cell Biology Cyclostomes Lack Clustered Protocadherins Sydney Brenner, Wei-Ping Yu, Nisha E. Pillai, Michelle M. Lian, Boon-Hui Tay, Sumanty Tohari, Vydianathan Ravi, Byrappa Venkatesh Molecular Biology and Evolution
15 Oct 2015 BMRC Institute of Molecular and Cell Biology Early Evolution of Vertebrate Mybs: An Integrative Perspective Combining Synteny, Phylogenetic, and Gene Expression Analyses Emeline B. Campanini, Michael W. Vandewege, Nisha E. Pillai, Boon-Hui Tay, Justin L. Jones, Byrappa Venkatesh, Federico G. Hoffmann Genome Biology and Evolution
4 Mar 2015 BMRC Institute of Molecular and Cell Biology Ancient Duplications and Expression Divergence in the Globin Gene Superfamily of Vertebrates: Insights from the Elephant Shark Genome and Transcriptome Juan C. Opazo, Alison P. Lee, Federico G. Hoffmann, Jessica Toloza-Villalobos, Thorsten Burmester, Byrappa Venkatesh, Jay F. Storz Molecular Biology and Evolution
2 Dec 2014 BMRC Institute of Molecular and Cell Biology Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes Xinxin You, Chao Bian, Qijie Zan, Xun Xu, Xin Liu, Jieming Chen, Jintu Wang, Ying Qiu, Wujiao Li, Xinhui Zhang, Ying Sun, Shixi Chen, Wanshu Hong, Yuxiang Li, Shifeng Cheng, Guangyi Fan, Chengcheng Shi, Jie Liang, Y. Tom Tang, Chengye Yang, Zhiqiang Ruan, Jie Bai, Chao Peng, Qian Mu, Jun Lu, Mingjun Fan, Shuang Yang, Zhiyong Huang, Xuanting Jiang, Xiaodong Fang, Guojie Zhang, Yong Zhang, Gianluca Polgar, Hui Yu, Jia Li, Zhongjian Liu, Guoqiang Zhang, Vydianathan Ravi, Steven L. Coon, Jian Wang, Huanming Yang, Byrappa Venkatesh, Jun Wang, Qiong Shi Nature Communications
18 Nov 2014 BMRC Institute of Molecular and Cell Biology Characterization of the Runx Gene Family in a Jawless Vertebrate, the Japanese Lamprey (Lethenteron japonicum) Giselle Sek Suan Nah, Boon-Hui Tay, Sydney Brenner, Motomi Osato, Byrappa Venkatesh, Nikolas Nikolaidis PLoS ONE
3 Sep 2014 BMRC Institute of Molecular and Cell Biology The genomic substrate for adaptive radiation in African cichlid fish Francis Galibert, David Brawand, Catherine E. Wagner, Yang I. Li, Milan Malinsky, Irene Keller, Shaohua Fan, Oleg Simakov, Alvin Y. Ng, Zhi Wei Lim, Etienne Bezault, Jason Turner-Maier, Jeremy Johnson, Rosa Alcazar, Hyun Ji Noh, Pamela Russell, Bronwen Aken, Jessica Alföldi, Chris Amemiya, Naoual Azzouzi, Jean-François Baroiller, Frederique Barloy-Hubler, Aaron Berlin, Ryan Bloomquist, Karen L. Carleton, Matthew A. Conte, Helena D'Cotta, Orly Eshel, Leslie Gaffney, Walter Salzburger, Luis Sanchez-Pulido, M. Emilia Santos, Steve Searle, Ted Sharpe, Ross Swofford, Frederick J. Tan, Louise Williams, Sarah Young, Shuangye Yin, Norihiro Okada, Thomas D. Kocher, Eric A. Miska, Eric S. Lander, Byrappa Venkatesh, Russell D. Fernald, Hugo F. Gante, Sante Gnerre, Lucie Greuter, Richard Guyon, Natalie S. Haddad, Wilfried Haerty, Rayna M. Harris, Hans A. Hofmann, Thibaut Hourlier, Gideon Hulata, David B. Jaffe, Marcia Lara, Alison P. Lee, Iain MacCallum, Salome Mwaiko, Masato Nikaido, Hidenori Nishihara, Catherine Ozouf-Costaz, David J. Penman, Dariusz Przybylski, Michaelle Rakotomanga, Suzy C. P. Renn, Filipe J. Ribeiro, Micha Ron, Axel Meyer, Chris P. Ponting, J. Todd Streelman, Kerstin Lindblad-Toh, Ole Seehausen, Federica Di Palma Nature
5 May 2014 BMRC Institute of Molecular and Cell Biology On the origin of SCPP genes Wesley C. Warren, Byrappa Venkatesh, Alison P. Lee, Vydianathan Ravi, Ashish K. Maurya, Vladimir Korzh, Zhi Wei Lim, Philip W. Ingham, Thomas Boehm, Sydney Brenner Evolution & Development
28 Apr 2014 BMRC Institute of Molecular and Cell Biology Evolving Hox Activity Profiles Govern Diversity in Locomotor Systems Heekyung Jung, Esteban O. Mazzoni, Natalia Soshnikova, Olivia Hanley, Byrappa Venkatesh, Denis Duboule, Jeremy S. Dasen Developmental Cell
3 Apr 2014 BMRC Institute of Molecular and Cell Biology Runx Family Genes in a Cartilaginous Fish, the Elephant Shark (Callorhinchus milii) Giselle Sek Suan Nah, Zhi Wei Lim, Boon-Hui Tay, Motomi Osato, Byrappa Venkatesh, Andre van Wijnen PLoS ONE
1 Mar 2014 BMRC Institute of Molecular and Cell Biology A survey of ancient conserved non-coding elements in the PAX6 locus reveals a landscape of interdigitated cis-regulatory archipelagos Shipra Bhatia, Jack Monahan, Vydianathan Ravi, Philippe Gautier, Emma Murdoch, Sydney Brenner, Veronica van Heyningen, Byrappa Venkatesh, Dirk A. Kleinjan Developmental Biology
8 Jan 2014 BMRC Molecular Engineering Laboratory Elephant shark genome provides unique insights into gnathostome evolution Byrappa Venkatesh, Alison P. Lee, Vydianathan Ravi, Ashish K. Maurya, Michelle M. Lian, Jeremy B. Swann, Yuko Ohta, Martin F. Flajnik, Yoichi Sutoh, Masanori Kasahara, Shawn Hoon, Vamshidhar Gangu, Scott W. Roy, Manuel Irimia, Vladimir Korzh, Igor Kondrychyn, Zhi Wei Lim, Boon-Hui Tay, Sumanty Tohari, Kiat Whye Kong, Shufen Ho, Belen Lorente-Galdos, Javier Quilez, Tomas Marques-Bonet, Brian J. Raney, Philip W. Ingham, Alice Tay, LaDeana W. Hillier, Patrick Minx, Thomas Boehm, Richard K. Wilson, Sydney Brenner, Wesley C. Warren Nature